Description

TNF receptor-associated factor 5 [Source:MGI Symbol;Acc:MGI:107548]

INSDC coordinates

chromosome:GRCm38:CM000994.2:191997205:192092559:1

About this gene

This gene has 5 transcripts (splice variants), 71 orthologues, 5 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Traf5-201ENSMUST000000855731964552aaENSMUSP00000082710
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9QMA6 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Traf5-004ENSMUST00000192628976250aaENSMUSP00000141584
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YWK3 NM_011633
NP_035763
CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Traf5-001ENSMUST00000195815414138aaENSMUSP00000141931
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YXC4 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Traf5-002ENSMUST000001933552084No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Traf5-003ENSMUST000001944081414No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays