Description

synaptotagmin II [Source:MGI Symbol;Acc:MGI:99666]

INSDC coordinates

chromosome:GRCm38:CM000994.2:134646677:134762593:1

About this gene

This gene has 4 transcripts (splice variants), 75 orthologues, 12 paralogues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Syt2-001ENSMUST000001219906879422aaENSMUSP00000112438
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS15312P46097 Q5DTI3 Q9JM87
Q9JM88 Q9JM89
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Syt2-002ENSMUST000001888423386422aaENSMUSP00000140081
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS15312P46097 Q5DTI3 Q9JM87
Q9JM88 Q9JM89
NM_009307
NP_033333
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Syt2-003ENSMUST0000018772538369aaENSMUSP00000141156
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q9JM87 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Syt2-004ENSMUST00000187702485No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays