Description

splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]

Location
INSDC coordinates

chromosome:GRCm38:CM001012.2:6363690:6378030:1

Transcripts

This gene has 15 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Sf1-002ENSMUST000001312524353 bp639 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50368D3YVH4 Q3UI45 Q64213
NM_001110791
NP_001104261
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sf1-001ENSMUST000001134872649 bp548 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50369D3YVH4 E9Q4Q2 NM_011750
NP_035880
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sf1-013ENSMUST000001134892863 bp571 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVH4 D3YZC9 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sf1-003ENSMUST000001134882282 bp638 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVH4 D3YZD0 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Sf1-010ENSMUST000001559731000 bp267 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVH4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sf1-008ENSMUST00000125516905 bp225 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Sf1-014ENSMUST00000124667755 bp200 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6Z9W2 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Sf1-015ENSMUST00000162237513 bp172 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Sf1-012ENSMUST000001134853221 bp110 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RDB7 F8WHF9 -
Sf1-009ENSMUST00000144409718 bp84 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RDB7 -
Sf1-011ENSMUST00000154260455 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Sf1-005ENSMUST00000146298869 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Sf1-006ENSMUST00000144239785 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Sf1-004ENSMUST00000131083489 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Sf1-007ENSMUST00000131677408 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays