Description

synaptotagmin VII [Source:MGI Symbol;Acc:MGI:1859545]

Location
INSDC coordinates

chromosome:GRCm38:CM001012.2:10389090:10453181:1

About this gene

This gene has 3 transcripts (splice variants), 68 orthologues, 15 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Syt7-203ENSMUST000001691216834567aaENSMUSP00000127973
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50388E9PZA8 NM_173068
NP_775091
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Syt7-202ENSMUST000000769686474447aaENSMUSP00000076234
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29576Q8CF96 NM_173067
NP_775090
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Syt7-201ENSMUST000000738996342403aaENSMUSP00000073560
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29575Q9R0N7 NM_018801
NP_061271
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays