Description

solute carrier family 38, member 1 [Source:MGI Symbol;Acc:MGI:2145895]

Location
INSDC coordinates

chromosome:GRCm38:CM001008.2:96571418:96642913:1

About this gene

This gene has 3 transcripts (splice variants), 56 orthologues, 7 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Slc38a1-203ENSMUST000001002627752485aaENSMUSP00000097833
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27777Q8K2P7 NM_134086
NP_598847
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Slc38a1-201ENSMUST000000884527266485aaENSMUSP00000085799
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27777Q8K2P7 NM_001166458
NP_001159930
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Slc38a1-202ENSMUST000000884547059485aaENSMUSP00000085801
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27777Q8K2P7 NM_001166456
NP_001159928
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays