Description

PRP40 pre-mRNA processing factor 40 homolog B (yeast) [Source:MGI Symbol;Acc:MGI:1925583]

Location
INSDC coordinates

chromosome:GRCm38:CM001008.2:99295087:99317018:1

Transcripts

This gene has 15 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Prpf40b-001ENSMUST000001454823308 bp873 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27818D3Z1Y9 Q80W14 NM_018786
NP_061256
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Prpf40b-006ENSMUST000001182873129 bp870 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z1Y9 E9QP07 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Prpf40b-011ENSMUST000001369803047 bp857 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z4N6 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Prpf40b-010ENSMUST000000237452619 bp852 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z1Y9 E9QMI6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Prpf40b-008ENSMUST00000150636892 bp189 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6QF44 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Prpf40b-007ENSMUST00000134034891 bp257 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Prpf40b-015ENSMUST00000126955780 bp86 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6W479 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Prpf40b-012ENSMUST00000128352658 bp136 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z1Y9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Prpf40b-013ENSMUST000001408061000 bp92 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RD12 -
Prpf40b-003ENSMUST000001506414065 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Prpf40b-005ENSMUST000001380362993 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Prpf40b-002ENSMUST000001305752740 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Prpf40b-016ENSMUST00000139330906 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Prpf40b-014ENSMUST00000153692818 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Prpf40b-009ENSMUST00000124275590 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays