Gene: Slc25a17 ENSMUSG00000022404

Description

solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 [Source:MGI Symbol;Acc:MGI:1342248]

Gene Synonyms

34kDa, PMP34

Location

Chromosome 15: 81,203,112-81,245,013 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 7 transcripts (splice variants), 205 orthologues, 48 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000023040.9	Slc25a17-201	1724	307aa	ENSMUSP00000023040.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27666	O70579	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000231140.2	Slc25a17-207	843	186aa	ENSMUSP00000155823.2	Nonsense mediated decay		A0A2R8VI88	-
ENSMUST00000230309.2	Slc25a17-204	384	52aa	ENSMUSP00000155849.2	Nonsense mediated decay		A0A2R8VI81	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000230983.2	Slc25a17-205	211	26aa	ENSMUSP00000154824.2	Nonsense mediated decay		A0A2R8VH23	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000229564.2	Slc25a17-202	384	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000229617.2	Slc25a17-203	869	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000231078.2	Slc25a17-206	629	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Slc25a17 ENSMUSG00000022404

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Gene: Slc25a17 ENSMUSG00000022404

Summary

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