Description

fibroblast growth factor 9 [Source:MGI Symbol;Acc:MGI:104723]

Location
INSDC coordinates

chromosome:GRCm38:CM001007.2:58070547:58112337:1

Transcripts

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Fgf9-001ENSMUST000000225451593208 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27164E9Q2N2 E9Q864 P54130
NM_013518
NP_038546
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Fgf9-003ENSMUST00000165526321091 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q2N2 E9Q864 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Fgf9-002ENSMUST00000074654119891 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q2N2 E9Q864 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Fgf9-004ENSMUST0000016677032130 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q864 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays