Description

fibroblast growth factor 9 [Source:MGI Symbol;Acc:MGI:104723]

Location
INSDC coordinates

chromosome:GRCm38:CM001007.2:58070547:58112337:1

About this gene

This gene has 4 transcripts (splice variants), 49 orthologues, 13 paralogues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Fgf9-001ENSMUST000000225451593208aaENSMUSP00000022545
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27164E9Q2N2 E9Q864 P54130
NM_013518
NP_038546
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Fgf9-003ENSMUST00000165526321091aaENSMUSP00000131358
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q2N2 E9Q864 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Fgf9-002ENSMUST00000074654119891aaENSMUSP00000088143
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q2N2 E9Q864 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Fgf9-004ENSMUST0000016677032130aaENSMUSP00000130066
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q864 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays