Description

opsin 4 (melanopsin) [Source:MGI Symbol;Acc:MGI:1353425]

Location
INSDC coordinates

chromosome:GRCm38:CM001007.2:34590618:34600142:1

Transcripts

This gene has 2 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Opn4-202ENSMUST000001684442259466 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS49446Q9QXZ9 NM_001128599
NP_001122071
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
Opn4-201ENSMUST000000223312156521 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26943Q9QXZ9 NM_013887
NP_038915
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence)
Glossary entry for APPRIS
APPRIS website

Gene-based displays