Description

LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412]

Location
INSDC coordinates

chromosome:GRCm38:CM001007.2:34526699:34588681:1

About this gene

This gene has 5 transcripts (splice variants), 66 orthologues, 12 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Ldb3-201ENSMUST000000223275040723aaENSMUSP00000022327
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26941Q3TRD4 Q9JKS4 NM_011918
NP_036048
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI4APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
Ldb3-205ENSMUST000000900404954684aaENSMUSP00000087494
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36879Q3TRD4 Q9JKS4 NM_001039073
NM_001039074
NP_001034162
NP_001034163
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Ldb3-204ENSMUST000000640984908679aaENSMUSP00000066784
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36878E9PYJ9 Q3TRD4 NM_001039072
NP_001034161
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Ldb3-202ENSMUST000000223284854661aaENSMUSP00000022328
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26940Q3TRD4 Q9JKS4 NM_001039071
NP_001034160
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Ldb3-203ENSMUST000000223301623327aaENSMUSP00000022330
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26942Q9JKS4 NM_001039076
NP_001034165
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays