Description

mediator complex subunit 7 [Source:MGI Symbol;Acc:MGI:1913463]

Location
INSDC coordinates

chromosome:GRCm38:CM001004.2:46436925:46442721:1

Transcripts

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Med7-003ENSMUST000001092322547233 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36134F2Z3X8 F2Z3Z0 F2Z449
F2Z466 F2Z473 Q9CZB6
NM_025426
NP_079702
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Med7-201ENSMUST000001709282390233 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36134F2Z3X8 F2Z3Z0 F2Z449
F2Z466 F2Z473 Q9CZB6
NM_001104556
NM_001104557
NP_001098026
NP_001098027
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Med7-004ENSMUST000000206651193233 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36134F2Z3X8 F2Z3Z0 F2Z449
F2Z466 F2Z473 Q9CZB6
NM_001104530
NP_001098000
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Med7-002ENSMUST00000109231778173 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F2Z3X8 F2Z3Z0 F2Z449
F2Z466 F2Z473
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Med7-008ENSMUST00000133635740133 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F2Z3X8 F2Z3Z0 F2Z449
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Med7-001ENSMUST00000128940702157 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F2Z3X8 F2Z3Z0 F2Z449
F2Z466
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Med7-005ENSMUST0000015211938193 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F2Z3Z0 F2Z449 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Med7-006ENSMUST0000014002733161 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F2Z3Z0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Med7-007ENSMUST00000156073445No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays