Gene: Smim23 ENSMUSG00000020270

Description

small integral membrane protein 23 [Source:MGI Symbol;Acc:MGI:1916601]

Gene Synonyms

1700008A04Rik

Location

Chromosome 11: 32,768,529-32,774,605 reverse strand.

GRCm39:CM001004.3

About this gene

This gene has 2 transcripts (splice variants), 66 orthologues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000020508.4	Smim23-201	620	136aa	ENSMUSP00000020508.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48767	Q9DAL0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000109365.8	Smim23-202	331	76aa	ENSMUSP00000104989.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PWJ8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Gene: Smim23 ENSMUSG00000020270

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Gene: Smim23 ENSMUSG00000020270

Summary

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