Description

IKAROS family zinc finger 1 [Source:MGI Symbol;Acc:MGI:1342540]

Location
INSDC coordinates

chromosome:GRCm38:CM001004.2:11685003:11772926:1

Transcripts

This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Ikzf1-201ENSMUST000000767005163515 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS24436G5E8H3 Q571F4 Q5GGW4
NM_001025597
NM_001301863
NM_001301865
NP_001020768
NP_001288792
NP_001288794
NP_001288797
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Ikzf1-003ENSMUST000000187981542428 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS24437Q5GGW4 Q5SWT7 Q5SWU0
NM_009578
NP_033604
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ikzf1-002ENSMUST000000654334697535 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5GGW4 Q5SWT9 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ikzf1-004ENSMUST00000048122911198 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5GGW4 Q5SWT7 Q8C9X3
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ikzf1-001ENSMUST0000012605844679 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5SWT7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Ikzf1-005ENSMUST0000014143624219 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays