Description

Hermansky-Pudlak syndrome 5 homolog (human) [Source:MGI Symbol;Acc:MGI:2180307]

Location
INSDC coordinates

chromosome:GRCm38:CM001000.2:46760466:46796064:1

Transcripts

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Hps5-001ENSMUST000000145624953 bp1126 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21286D3YYJ4 D3Z3L4 P59438
Q3TU08
NM_001005247
NM_001005248
NP_001005247
NP_001005248
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Hps5-003ENSMUST000001076534702 bp1093 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS52254D3YYJ4 D3Z3L4 E9Q3X4
Q3TU08
NM_001167864
NP_001161336
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Hps5-002ENSMUST000001076544422 bp1126 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21286D3YYJ4 D3Z3L4 P59438
Q3TU08
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Hps5-007ENSMUST000001537891602 bp534 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Hps5-008ENSMUST00000152759813 bp202 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YYJ4 D3Z3L4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Hps5-011ENSMUST00000130365760 bp254 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Hps5-009ENSMUST00000123725658 bp119 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z3L4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Hps5-005ENSMUST000001426634735 bp526 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3YYJ4 D3Z3L4 P59438
-
Hps5-012ENSMUST00000138480839 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Hps5-006ENSMUST00000124675286 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Hps5-004ENSMUST000001457764918 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Hps5-010ENSMUST00000157026674 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Hps5-013ENSMUST00000143627657 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays