Gene: Phox2b ENSMUSG00000012520

Description

paired-like homeobox 2b [Source:MGI Symbol;Acc:MGI:1100882]

Gene Synonyms

Dilp1, GENA 269, NBPhox, Phox2b, Pmx2b, Px2b

Location

Chromosome 5: 67,251,742-67,256,644 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 2 transcripts (splice variants), 194 orthologues, 47 paralogues and is associated with 57 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000012664.11	Phox2b-201	3013	314aa	ENSMUSP00000012664.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19316	O35690	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000174251.2	Phox2b-202	1177	192aa	ENSMUSP00000134216.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8C741	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Gene: Phox2b ENSMUSG00000012520

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Gene: Phox2b ENSMUSG00000012520

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