Description

brevican [Source:MGI Symbol;Acc:MGI:1096385]

Location
INSDC coordinates

chromosome:GRCm38:CM000996.2:87987531:88000230:1

About this gene

This gene has 6 transcripts (splice variants), 66 orthologues, 7 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Bcan-001ENSMUST000000909713141883aaENSMUSP00000088491
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS17462Q61361 NM_007529
NP_031555
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Bcan-002ENSMUST00000194193381105aaENSMUSP00000141455
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YW95 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Bcan-006ENSMUST000001922742431No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Bcan-005ENSMUST000001945961473No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Bcan-004ENSMUST00000193276568No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Bcan-003ENSMUST00000191627550No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays