Description

S100 calcium binding protein A6 (calcyclin) [Source:MGI Symbol;Acc:MGI:1339467]

Location
INSDC coordinates

chromosome:GRCm38:CM000996.2:90612882:90624181:1

About this gene

This gene has 4 transcripts (splice variants), 52 orthologues, 11 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
S100a6-001ENSMUST0000000105173189aaENSMUSP00000001051
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS38506P14069 Q545I9 NM_011313
NP_035443
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

S100a6-002ENSMUST0000019812846489aaENSMUSP00000143111
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q545I9 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

S100a6-004ENSMUST0000020028978389aaENSMUSP00000143720
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q545I9 -
S100a6-003ENSMUST00000197189338No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays