Description

catechol-O-methyltransferase [Source:MGI Symbol;Acc:MGI:88470]

Location

Chromosome 16: 18,406,886-18,426,852 reverse strand.

View alleles of this gene on alternate assemblies

INSDC coordinates

chromosome:GRCm38:CM001009.2:18406886:18426852:1

About this gene

This gene has 4 transcripts (splice variants), 1 gene allele, 73 orthologues, 1 paralogue and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Comt-201ENSMUST000001654301978265aaENSMUSP00000130077
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28021O88587 NM_001111063
NP_001104533
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Comt-001ENSMUST000001156091786265aaENSMUSP00000111272
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28021O88587 NM_007744
NP_031770
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Comt-003ENSMUST000000003351178265aaENSMUSP00000000335
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28021O88587 NM_001111062
NP_001104532
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Comt-002ENSMUST00000147720743171aaENSMUSP00000121810
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z227 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays