Description

caveolin 2 [Source:MGI Symbol;Acc:MGI:107571]

Location
INSDC coordinates

chromosome:GRCm38:CM000999.2:17281185:17289115:1

About this gene

This gene has 3 transcripts (splice variants), 59 orthologues, 2 paralogues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Cav2-001ENSMUST000000000582733162aaENSMUSP00000000058
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS19923Q9WVC3 NM_016900
NP_058596
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Cav2-002ENSMUST00000115459974113aaENSMUSP00000111119
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS71727Q924U4 NM_001277756
NP_001264685
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Cav2-003ENSMUST00000115462694117aaENSMUSP00000111122
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z147 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays