Description

apolipoprotein H [Source:MGI Symbol;Acc:MGI:88058]

INSDC coordinates

chromosome:GRCm38:CM001004.2:108343354:108414396:1

Transcripts

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Apoh-001ENSMUST000000000491190345 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25574I7HJR3 I7HPW5 J3JS85
Q01339 Q6LAL7
NM_013475
NP_038503
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Apoh-004ENSMUST00000152958731154 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I7HJR3 I7HPW5 J3JS85
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Apoh-003ENSMUST0000014605037433 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3JS85 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Apoh-002ENSMUST0000013338336751 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I7HPW5 J3JS85 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays