Gene: Ccdc92 ENSMUSG00000037979

Description

coiled-coil domain containing 92 [Source:MGI Symbol;Acc:MGI:106485]

Gene Synonyms

D5Bwg0834e

Location

Chromosome 5: 124,911,482-124,939,488 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 3 transcripts (splice variants), 200 orthologues, 1 paralogue and is associated with 48 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000036206.14	Ccdc92-201	2473	314aa	ENSMUSP00000038075.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19681	Q8VDN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000143268.2	Ccdc92-203	445	131aa	ENSMUSP00000114983.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YUR9	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000135495.8	Ccdc92-202	809	64aa	ENSMUSP00000119438.2	Nonsense mediated decay		D6RJ58	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Gene: Ccdc92 ENSMUSG00000037979

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Gene: Ccdc92 ENSMUSG00000037979

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