Description

contactin associated protein-like 1 [Source:MGI Symbol;Acc:MGI:1858201]

INSDC coordinates

chromosome:GRCm38:CM001004.2:101170523:101190724:1

About this gene

This gene has 2 transcripts (splice variants), 63 orthologues, 9 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Cntnap1-001ENSMUST0000010310954401385aaENSMUSP00000099398
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25455O54991 NM_016782
NP_058062
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Cntnap1-002ENSMUST00000138942664No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Stable ID

ENSMUSG00000017167.6

Status

Current

Latest Version

ENSMUSG00000017167.6

Release: 80 (current)

Assembly: GRCm38

Database: mus_musculus_core_80_38

Associated archived IDs for this stable ID version

No associated IDs found

Gene-based displays