Description

toll-like receptor 5 [Source:MGI Symbol;Acc:MGI:1858171]

INSDC coordinates

chromosome:GRCm38:CM000994.2:182954788:182976044:1

About this gene

This gene has 5 transcripts (splice variants), 59 orthologues, 12 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Tlr5-201ENSMUST000001109973199873aaENSMUSP00000106625
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35815E9QL10 NM_016928
NP_058624
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Tlr5-002ENSMUST000001918203818859aaENSMUSP00000141458
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q05AH3 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Tlr5-001ENSMUST000001936872847853aaENSMUSP00000141318
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A0A6YVY4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Tlr5-003ENSMUST00000193539888No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Tlr5-004ENSMUST00000195614498No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Gene-based displays