Description

arachidonate 5-lipoxygenase activating protein [Source:MGI Symbol;Acc:MGI:107505]

INSDC coordinates

chromosome:GRCm38:CM000998.2:149265058:149288045:1

About this gene

This gene has 2 transcripts (splice variants), 62 orthologues, 2 paralogues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Alox5ap-201ENSMUST00000071130852161aaENSMUSP00000071130
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS39407P30355 NM_009663
NP_033793
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Alox5ap-001ENSMUST0000013014412523aaENSMUSP00000119413
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z294 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays