Description

gap junction protein, beta 1 [Source:MGI Symbol;Acc:MGI:95719]

INSDC coordinates

chromosome:GRCm38:CM001013.2:101376378:101385629:1

About this gene

This gene has 3 transcripts (splice variants), 75 orthologues, 7 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Gjb1-002ENSMUST000001191901585283aaENSMUSP00000113516
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30314P28230 NM_001302497
NM_001302498
NP_001289426
NP_001289427
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gjb1-001ENSMUST000000521301565283aaENSMUSP00000062723
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30314P28230 NM_001302498
NM_008124
NP_001289427
NP_032150
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gjb1-003ENSMUST000001190801513283aaENSMUSP00000113904
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS30314P28230 NM_001302496
NP_001289425
TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays