Description

S100 calcium binding protein A1 [Source:MGI Symbol;Acc:MGI:1338917]

Location
INSDC coordinates

chromosome:GRCm38:CM000996.2:90511034:90514392:1

About this gene

This gene has 2 transcripts (splice variants), 52 orthologues, 11 paralogues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
S100a1-001ENSMUST0000006073867794aaENSMUSP00000058237
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS38503Q91V77 NM_011309
NP_035439
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

S100a1-002ENSMUST0000010734057763aaENSMUSP00000102963
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YUT6 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays