Description

phosphatidylinositol 3-kinase catalytic delta polypeptide [Source:MGI Symbol;Acc:MGI:1098211]

INSDC coordinates

chromosome:GRCm38:CM000997.2:149649168:149702571:1

About this gene

This gene has 14 transcripts (splice variants), 65 orthologues, 7 paralogues and is a member of 3 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Pik3cd-001ENSMUST0000010569049211047aaENSMUSP00000101315
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51384B1AS24 B1AS25 B1AS26
B1AS27 B1AS28 Q3T9Y0
NM_001164049
NP_001157521
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI4APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
Pik3cd-003ENSMUST0000003885949051045aaENSMUSP00000036434
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51383B1AS24 B1AS25 B1AS26
B1AS27 B1AS28 Q8CI98
NM_001164050
NP_001157522
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1APPRIS candidate principal isoform that is conserved in at least three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Pik3cd-007ENSMUST0000011870448941046aaENSMUSP00000112863
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51381B1AS24 B1AS25 B1AS26
B1AS27 B1AS28 Q3TBW3
NM_001164051
NP_001157523
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pik3cd-201ENSMUST0000017765447651047aaENSMUSP00000136045
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51384B1AS24 B1AS25 B1AS26
B1AS27 B1AS28 Q3T9Y0
NM_001029837
NP_001025008
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI4APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
Pik3cd-013ENSMUST0000010568843351044aaENSMUSP00000101313
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51382B1AS24 B1AS25 B1AS26
B1AS27 B1AS28 Q3UDT3
NM_008840
NP_032866
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1APPRIS candidate principal isoform that is conserved in at least three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Pik3cd-002ENSMUST0000010568931321043aaENSMUSP00000101314
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51380B1AS24 B1AS25 B1AS26
B1AS27 B1AS28 O35904
NM_001164052
NP_001157524
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Pik3cd-012ENSMUST0000012205948321040aaENSMUSP00000113844
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B0QZL5 B1AS24 B1AS25
B1AS26 B1AS27 B1AS28
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1APPRIS candidate principal isoform that is conserved in at least three tested non-primate species
Glossary entry for APPRIS
APPRIS website
Pik3cd-009ENSMUST00000146612729117aaENSMUSP00000121843
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AS26 B1AS27 B1AS28
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Pik3cd-005ENSMUST00000127273716171aaENSMUSP00000119858
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AS24 B1AS25 B1AS26
B1AS27 B1AS28
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Pik3cd-004ENSMUST00000131224699145aaENSMUSP00000115542
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AS24 B1AS26 B1AS27
B1AS28
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Pik3cd-010ENSMUST0000013453443662aaENSMUSP00000118988
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AS27 B1AS28 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Pik3cd-011ENSMUST0000015630932744aaENSMUSP00000115716
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AS28 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Pik3cd-008ENSMUST00000137430824No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Pik3cd-006ENSMUST00000124510404No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays