Description

LIM domain binding 2 [Source:MGI Symbol;Acc:MGI:894670]

Location
INSDC coordinates

chromosome:GRCm38:CM000998.2:44472132:44799680:1

About this gene

This gene has 7 transcripts (splice variants), 69 orthologues, 1 paralogue and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Ldb2-001ENSMUST000000707482418373aaENSMUSP00000067737
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS19271O55203 NM_010698
NP_034828
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ldb2-002ENSMUST000001992562596329aaENSMUSP00000143775
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--NM_001077398
NP_001070866
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ldb2-003ENSMUST000001995342541331aaENSMUSP00000142442
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--NM_001286348
NP_001273277
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Ldb2-004ENSMUST000001992612367371aaENSMUSP00000143289
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT1

ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ldb2-006ENSMUST00000198356780No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Ldb2-007ENSMUST00000199471608No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Ldb2-008ENSMUST00000198894635No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays