Description

early growth response 2 [Source:MGI Symbol;Acc:MGI:95296]

Location
INSDC coordinates

chromosome:GRCm38:CM001003.2:67535475:67542188:1

About this gene

This gene has 7 transcripts (splice variants), 69 orthologues, 5 paralogues and is a member of 3 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Egr2-001ENSMUST000000482892965470aaENSMUSP00000041053
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35927P08152 Q3U207 NM_010118
NP_034248
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Egr2-002ENSMUST000001054382864420aaENSMUSP00000101078
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-P08152 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Egr2-003ENSMUST000001278202665412aaENSMUSP00000116799
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z3K7 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Egr2-006ENSMUST00000145936902282aaENSMUSP00000115709
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YYY2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Egr2-005ENSMUST00000145754773237aaENSMUSP00000116621
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z4G7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Egr2-004ENSMUST0000013093342736aaENSMUSP00000116502
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z4X9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Egr2-007ENSMUST0000014698635672aaENSMUSP00000118941
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YXS2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays