Description

tenascin XB [Source:MGI Symbol;Acc:MGI:1932137]

Location
INSDC coordinates

chromosome:GRCm38:CM001010.2:34670535:34719815:1

About this gene

This gene has 2 transcripts (splice variants), 56 orthologues, 11 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Tnxb-002ENSMUST0000016853393813126aaENSMUSP00000127487
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28656E9Q2T3 NM_031176
NP_112453
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Tnxb-001ENSMUST00000087399122094006aaENSMUSP00000084661
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O35452 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays