Description

polyglutamine binding protein 1 [Source:MGI Symbol;Acc:MGI:1859638]

Location
INSDC coordinates

chromosome:GRCm38:CM001013.2:7894519:7899269:1

About this gene

This gene has 5 transcripts (splice variants), 61 orthologues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Pqbp1-002ENSMUST000001156541374263aaENSMUSP00000111318
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29977A2AER7 Q91VJ5 NM_001252528
NP_001239457
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Pqbp1-004ENSMUST000001156551148263aaENSMUSP00000111319
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29977A2AER7 Q91VJ5 NM_019478
NP_062351
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Pqbp1-001ENSMUST000000334971104263aaENSMUSP00000033497
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29977A2AER7 Q91VJ5 NM_001252529
NP_001239458
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Pqbp1-003ENSMUST00000156741763236aaENSMUSP00000123657
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AER8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Pqbp1-005ENSMUST00000154552436100aaENSMUSP00000114924
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2AER9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays