Description

ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) [Source:MGI Symbol;Acc:MGI:107537]

INSDC coordinates

chromosome:GRCm38:CM001000.2:126571207:126585817:1

Transcripts

This gene has 19 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
Cln3-002ENSMUST000000845893203 bp438 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21833D3YUU4 D3YVA8 D3YZN0
D3Z6L5 Q61124
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Cln3-201ENSMUST000001162692487 bp438 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21833D3YUU4 D3YVA8 D3YZN0
D3Z6L5 Q61124
NM_001146311
NP_001139783
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Cln3-001ENSMUST000000329622386 bp438 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21833D3YUU4 D3YVA8 D3YZN0
D3Z6L5 Q61124
NM_009907
NP_034037
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Cln3-003ENSMUST000000980361571 bp414 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVA8 D3YZN0 D3Z448
D3Z6L5 Q6PAH4
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Cln3-008ENSMUST00000128970834 bp196 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YUU4 D3YVA8 D3YZN0
D3Z6L5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cln3-011ENSMUST00000125508725 bp151 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVA8 D3YZN0 D3Z448
D3Z6L5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cln3-007ENSMUST00000150311594 bp69 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVA8 D3Z6L5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cln3-010ENSMUST00000150587525 bp70 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVA8 D3YZN0 D3Z6L5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cln3-009ENSMUST00000147086460 bp51 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVA8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cln3-012ENSMUST00000150917771 bp77 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3YVA8 D3YZN0 D3Z6L5
S4R2L1
-
Cln3-014ENSMUST00000128225977 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Cln3-013ENSMUST00000134498809 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Cln3-017ENSMUST00000139766537 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Cln3-018ENSMUST00000138285527 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Cln3-006ENSMUST00000128049414 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Cln3-004ENSMUST000001537901821 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Cln3-016ENSMUST00000134406913 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Cln3-005ENSMUST00000124177812 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Cln3-015ENSMUST00000134246506 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays