Description

sirtuin 3 [Source:MGI Symbol;Acc:MGI:1927665]

INSDC coordinates

chromosome:GRCm38:CM001000.2:140863670:140882309:1

About this gene

This gene has 5 transcripts (splice variants), 58 orthologues, 1 paralogue and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Sirt3-001ENSMUST000000265591461257aaENSMUSP00000026559
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21989Q4FJK3 Q8R104 NM_022433
NP_071878
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Sirt3-002ENSMUST000001060481416257aaENSMUSP00000101663
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21989Q4FJK3 Q8R104 NM_001127351
NM_001177804
NP_001120823
NP_001171275
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Sirt3-004ENSMUST00000147331784258aaENSMUSP00000121151
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YTK6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Sirt3-005ENSMUST00000137024690182aaENSMUSP00000114247
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVQ5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Sirt3-003ENSMUST00000137710456100aaENSMUSP00000115202
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YWD6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays