Description

solute carrier family 29 (nucleoside transporters), member 1 [Source:MGI Symbol;Acc:MGI:1927073]

Location
INSDC coordinates

chromosome:GRCm38:CM001010.2:45585200:45599606:1

Transcripts

This gene has 25 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
Slc29a1-007ENSMUST000001634922216458 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28813E9PVH9 E9PWD6 E9PXQ6
E9PZV0 E9Q0Q5 E9Q221
E9Q3D1 E9Q503 E9Q5E9
E9Q7R8 Q3TCZ2 Q9JIM1
NM_022880
NP_075018
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
Slc29a1-003ENSMUST000001676922092460 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57096E9PVH9 E9PWD6 E9PWY7
E9PXQ6 E9PZV0 E9Q0Q5
E9Q221 E9Q3D1 E9Q503
E9Q5E9 E9Q7R8 Q9JIM1
NM_001199113
NP_001186042
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence)
Glossary entry for APPRIS
APPRIS website
Slc29a1-001ENSMUST000001718472033458 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28813E9PVH9 E9PWD6 E9PXQ6
E9PZV0 E9Q0Q5 E9Q221
E9Q3D1 E9Q503 E9Q5E9
E9Q7R8 Q3TCZ2 Q9JIM1
NM_001199115
NP_001186044
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
Slc29a1-201ENSMUST000000515741996460 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57096E9PVH9 E9PWD6 E9PWY7
E9PXQ6 E9PZV0 E9Q0Q5
E9Q221 E9Q3D1 E9Q503
E9Q5E9 E9Q7R8 Q9JIM1
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence)
Glossary entry for APPRIS
APPRIS website
Slc29a1-002ENSMUST000000648891988458 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS28813E9PVH9 E9PWD6 E9PXQ6
E9PZV0 E9Q0Q5 E9Q221
E9Q3D1 E9Q503 E9Q5E9
E9Q7R8 Q3TCZ2 Q9JIM1
NM_001199116
NP_001186045
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
Slc29a1-006ENSMUST000000973171931460 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57096E9PVH9 E9PWD6 E9PWY7
E9PXQ6 E9PZV0 E9Q0Q5
E9Q221 E9Q3D1 E9Q503
E9Q5E9 E9Q7R8 Q9JIM1
NM_001199114
NP_001186043
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence)
Glossary entry for APPRIS
APPRIS website
Slc29a1-005ENSMUST000001661191598460 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57096E9PVH9 E9PWD6 E9PWY7
E9PXQ6 E9PZV0 E9Q0Q5
E9Q221 E9Q3D1 E9Q503
E9Q5E9 E9Q7R8 Q9JIM1
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI1APPRIS candidate principal isoform (longest coding sequence)
Glossary entry for APPRIS
APPRIS website
Slc29a1-008ENSMUST000001647691226358 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PVH9 E9PWD6 E9PWY7
E9PXM6 E9PXQ6 E9PZV0
E9Q0Q5 E9Q221 E9Q3D1
E9Q503 E9Q5E9 E9Q7R8
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Slc29a1-004ENSMUST000001642171062262 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PVH9 E9PWD6 E9PWY7
E9PXQ6 E9PZV0 E9Q0Q5
E9Q221 E9Q3D1 E9Q503
E9Q5E9 E9Q7R8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-012ENSMUST00000166633873195 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PVH9 E9PWD6 E9PXQ6
E9PZV0 E9Q0Q5 E9Q221
E9Q3D1 E9Q503 E9Q5E9
E9Q7R8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-022ENSMUST00000171081862262 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PVH9 E9PWD6 E9PWY7
E9PXQ6 E9PZV0 E9Q0Q5
E9Q221 E9Q3D1 E9Q503
E9Q5E9 E9Q7R8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-021ENSMUST00000163905837160 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PWD6 E9PZV0 E9Q0Q5
E9Q221 E9Q3D1 E9Q503
E9Q5E9 E9Q7R8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-019ENSMUST0000016733262693 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q0Q5 E9Q221 E9Q5E9
E9Q7R8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-015ENSMUST00000164618598162 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PVH9 E9PWD6 E9PZV0
E9Q0Q5 E9Q221 E9Q3D1
E9Q503 E9Q5E9 E9Q7R8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-011ENSMUST00000169729543114 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q3D1 E9Q503 E9Q7R8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-010ENSMUST00000172301520121 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PWD6 E9Q0Q5 E9Q221
E9Q5E9 E9Q7R8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-016ENSMUST00000167195459105 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q503 E9Q7R8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-014ENSMUST0000017011340356 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q0Q5 E9Q5E9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-013ENSMUST0000016827435742 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q0Q5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-018ENSMUST0000017048834839 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q7R8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-024ENSMUST00000171978736No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-009ENSMUST000001718762007No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-017ENSMUST00000167863944No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-020ENSMUST00000170425907No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Slc29a1-023ENSMUST00000167748769No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays