Description

transglutaminase 1, K polypeptide [Source:MGI Symbol;Acc:MGI:98730]

Location
INSDC coordinates

chromosome:GRCm38:CM001007.2:55700009:55713492:1

About this gene

This gene has 3 transcripts (splice variants), 77 orthologues, 8 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeqFlags
Tgm1-202ENSMUST000001687292852815aaENSMUSP00000128090
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36932NM_001161715
NP_001155187
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Tgm1-201ENSMUST000000023892801815aaENSMUSP00000002389
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36932NM_019984
NP_064368
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Tgm1-203ENSMUST000001780342753815aaENSMUSP00000137642
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS36932NM_001161714
NP_001155186
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays