Description

SPARC related modular calcium binding 1 [Source:MGI Symbol;Acc:MGI:1929878]

Location
INSDC coordinates

chromosome:GRCm38:CM001005.2:81026808:81186414:1

About this gene

This gene has 3 transcripts (splice variants), 67 orthologues, 1 paralogue, is a member of 1 Ensembl protein family and is associated with 32 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Smoc1-001ENSMUST000001103473496463aaENSMUSP00000105976
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS49102-NM_001146217
NP_001139689
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Smoc1-002ENSMUST000000215643439452aaENSMUSP00000021564
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26017E9QKW2 NM_022316
NP_071711
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Smoc1-003ENSMUST000001293623385434aaENSMUSP00000122858
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z3A3 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays