Description

leukotriene C4 synthase [Source:MGI Symbol;Acc:MGI:107498]

Location
INSDC coordinates

chromosome:GRCm38:CM001004.2:50236469:50238616:1

About this gene

This gene has 3 transcripts (splice variants), 49 orthologues, 2 paralogues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Ltc4s-001ENSMUST00000102772649150aaENSMUSP00000099833
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS24631Q60860 NM_008521
NP_032547
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Ltc4s-002ENSMUST00000125555716178aaENSMUSP00000121584
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5SVR6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Ltc4s-003ENSMUST00000101265480113aaENSMUSP00000098823
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8K355 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays