Description

synapsin II [Source:MGI Symbol;Acc:MGI:103020]

INSDC coordinates

chromosome:GRCm38:CM000999.2:115134902:115282626:1

About this gene

This gene has 2 transcripts (splice variants), 76 orthologues, 2 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Syn2-202ENSMUST000001693453854479aaENSMUSP00000133121
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51875Q64332 NM_013681
NP_038709
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Syn2-201ENSMUST000000095383343586aaENSMUSP00000009538
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS51874Q64332 NM_001111015
NP_001104485
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P4

PRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays