Description

tyrosinase-related protein 1 [Source:MGI Symbol;Acc:MGI:98881]

Location
INSDC coordinates

chromosome:GRCm38:CM000997.2:80834123:80851719:1

About this gene

This gene has 4 transcripts (splice variants), 75 orthologues, 2 paralogues and is a member of 1 Ensembl protein family.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Tyrp1-201ENSMUST000000061512720537aaENSMUSP00000006151
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18290P07147 Q3UFS3 NM_001282014
NM_001282015
NM_031202
NP_001268943
NP_001268944
NP_112479
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Tyrp1-001ENSMUST000001028312623537aaENSMUSP00000099895
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS18290P07147 Q3UFS3 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Tyrp1-003ENSMUST000001336551053229aaENSMUSP00000117080
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2ADJ4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Tyrp1-002ENSMUST00000133932529176aaENSMUSP00000119167
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2ADJ6 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays