Description

sonic hedgehog [Source:MGI Symbol;Acc:MGI:98297]

Location
INSDC coordinates

chromosome:GRCm38:CM000998.2:28456815:28467256:1

About this gene

This gene has 1 transcript (splice variant), 62 orthologues, 2 paralogues, is a member of 1 Ensembl protein family and is associated with 4 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
Shh-001ENSMUST000000027082847437aaENSMUSP00000002708
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS19146Q62226 NM_009170
NP_033196
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays