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Sequence and assembly

Contigs

Genes and transcripts

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Coding transcripts only (in coding genes)

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Primary Gene Annotations from GENCODE M37

The GENCODE set is the gene set for human and mouse. GENCODE Primary is a subset of representative transcripts (splice variants).

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Configure RNASeq models

Variation

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Failed variants

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Compact

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Regulation

Regulatory features

Regulatory features

Features from Ensembl Regulatory Build.

Configure Activity by Cell/Tissue

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Information and decorations

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Shows the scalebar
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Shows the length of the region being displayed
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Show counts of number of tracks turned off by the user
Information ()

Details of the region shown in the image
Variant Legend
Structural Variant Legend
Gene Legend
Alignment Difference Legend
Regulation Legend
Methylation Legend
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Looking for more data? Search the Trackhub Registry for external sources of annotation

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External data
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