Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Prdm5 MGP_CAROLIEiJ_G0028463

.

Description

PR/SET domain 5 [Source:NCBI gene;Acc:110296337]

Location

Chromosome 6: 60,132,838-60,292,357 forward strand.

CAROLI_EIJ_v1.1:LT608245.1

About this gene

This gene has 7 transcripts (splice variants), 203 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0074144.1	Prdm5-201	2156	599aa	MGP_CAROLIEiJ_P0074144	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0074149.1	Prdm5-206	1936	579aa	MGP_CAROLIEiJ_P0074149	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0074147.1	Prdm5-204	1489	415aa	MGP_CAROLIEiJ_P0074147	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0074146.1	Prdm5-203	985	221aa	MGP_CAROLIEiJ_P0074146	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0074148.1	Prdm5-205	4196	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0074145.1	Prdm5-202	1951	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0074150.1	Prdm5-207	1916	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

.

Summary

.

.