Description
splicing factor SWAP [Source:NCBI gene;Acc:110294719]
Location
Chromosome 5: 122,371,450-122,443,268 forward strand.
CAROLI_EIJ_v1.1:LT608240.1
About this gene
This gene has 15 transcripts (splice variants), 209 orthologues and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | Flags |
|---|---|---|---|---|---|---|
| MGP_CAROLIEiJ_T0071020.1 | Sfswap-201 | 3325 | 945aa | MGP_CAROLIEiJ_P0071020 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| MGP_CAROLIEiJ_T0071021.1 | Sfswap-202 | 2625 | 121aa | MGP_CAROLIEiJ_P0071021 | Nonsense mediated decay | - |
| MGP_CAROLIEiJ_T0071029.1 | Sfswap-210 | 559 | 68aa | MGP_CAROLIEiJ_P0071029 | Nonsense mediated decay | - |
| MGP_CAROLIEiJ_T0071024.1 | Sfswap-205 | 436 | 82aa | MGP_CAROLIEiJ_P0071024 | Nonsense mediated decay | - |
| MGP_CAROLIEiJ_T0071023.1 | Sfswap-204 | 5135 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_CAROLIEiJ_T0071026.1 | Sfswap-207 | 690 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_CAROLIEiJ_T0071031.1 | Sfswap-212 | 426 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_CAROLIEiJ_T0071022.1 | Sfswap-203 | 3387 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_CAROLIEiJ_T0071030.1 | Sfswap-211 | 2120 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_CAROLIEiJ_T0071032.1 | Sfswap-213 | 1289 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_CAROLIEiJ_T0071028.1 | Sfswap-209 | 716 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_CAROLIEiJ_T0071033.1 | Sfswap-214 | 689 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_CAROLIEiJ_T0071034.1 | Sfswap-215 | 681 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_CAROLIEiJ_T0071027.1 | Sfswap-208 | 305 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_CAROLIEiJ_T0071025.1 | Sfswap-206 | 651 | No protein | - | TEC | - |
