Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Nop58 MGP_CAROLIEiJ_G0014181

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Description

NOP58 ribonucleoprotein [Source:MGI Symbol;Acc:MGI:1933184]

Location

Chromosome 1: 53,801,281-53,828,648 forward strand.

CAROLI_EIJ_v1.1:LT608242.1

About this gene

This gene has 13 transcripts (splice variants), 218 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0017877.1	Nop58-206	1608	535aa	MGP_CAROLIEiJ_P0017877	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0017873.1	Nop58-202	1715	444aa	MGP_CAROLIEiJ_P0017873	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0017883.1	Nop58-212	635	211aa	MGP_CAROLIEiJ_P0017883	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0017884.1	Nop58-213	585	194aa	MGP_CAROLIEiJ_P0017884	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0017881.1	Nop58-210	714	191aa	MGP_CAROLIEiJ_P0017881	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0017876.1	Nop58-205	698	60aa	MGP_CAROLIEiJ_P0017876	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0017880.1	Nop58-209	598	145aa	MGP_CAROLIEiJ_P0017880	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0017882.1	Nop58-211	373	59aa	MGP_CAROLIEiJ_P0017882	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0017872.1	Nop58-201	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0017879.1	Nop58-208	890	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0017875.1	Nop58-204	743	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0017874.1	Nop58-203	647	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0017878.1	Nop58-207	622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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