Transcript: ENST00000477973.5 RYBP-201

Description

RING1 and YY1 binding protein [Source:HGNC Symbol;Acc:HGNC:10480]

Gene Synonyms

AAP1, DEDAF, YEAF1

Location

Chromosome 3: 72,371,825-72,446,621 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 23 domains and features, is associated with 35023 variant alleles and maps to 538 oligo probes.

Gene

This transcript is a product of gene ENSG00000163602.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000477973.5	RYBP-201	7215	218aa	ENSP00000419494.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8N488	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000677329.1	RYBP-204	4540	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000676660.1	RYBP-202	5615	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000676841.1	RYBP-203	1846	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 7,215 bps, Translation length: 218 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N488

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000477973.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000477973.5 RYBP-201

Summary

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Transcript: ENST00000477973.5 RYBP-201

Summary

About Us

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