Human (GRCh38.p14)
Description

solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]

Gene Synonyms

GAT2

Location
About this transcript

This transcript has 15 exons, is annotated with 39 domains and features, is associated with 18780 variant alleles and maps to 524 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000343164.9SLC6A13-2012188602aaENSP00000339260.4
 
Protein coding
CCDS8502Q9NSD5-1 NM_016615.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000445055.6SLC6A13-2031950510aaENSP00000407104.2
 
Protein coding
CCDS53729Q9NSD5-2 -GENCODE basicTSL:2
ENST00000436453.1SLC6A13-202110197aaENSP00000389316.1
 
Protein coding
CCDS58198Q9NSD5-3 -GENCODE basicTSL:1
ENST00000546319.5SLC6A13-212541150aaENSP00000444606.1
 
Protein coding
F5GZA5 -TSL:3CDS 3' incomplete
ENST00000539260.1SLC6A13-206607123aaENSP00000437386.1
 
Nonsense mediated decay
F5H6S9 -TSL:3
ENST00000542272.5SLC6A13-20856069aaENSP00000443466.1
 
Nonsense mediated decay
F5H5D9 -TSL:4
ENST00000539668.1SLC6A13-207425No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000542379.1SLC6A13-209340No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000536842.5SLC6A13-2051001No protein-
 
Retained intron
--TSL:3
ENST00000534887.1SLC6A13-204525No protein-
 
Retained intron
--TSL:5
ENST00000543722.1SLC6A13-211494No protein-
 
Retained intron
--TSL:3
ENST00000542947.1SLC6A13-210490No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,188 bps, Translation length: 602 residues

MANE

This MANE Select transcript contains ENSP00000339260 and matches to NM_016615.5 and NP_057699.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NSD5

CCDS

This transcript is a member of the Human CCDS set: CCDS8502

Transcript Support Level (TSL)

TSL:1

Version

ENST00000343164.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.