Transcript: ENST00000601072.3

Description

novel transcript

Location

Chromosome 19: 53,197,075-53,204,393 forward strand.

About this transcript

This transcript has 2 exons and maps to 173 oligo probes.

Gene

This transcript is a product of gene ENSG00000291131.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000795206.1	-	716	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000691047.2	-	2933	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000795213.1	-	1855	No protein	-	lncRNA	-	-
ENST00000795219.1	-	1797	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000795214.1	-	1711	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000597550.6	-	1349	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000795215.1	-	1059	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000795207.1	-	1039	No protein	-	lncRNA	-	-
ENST00000795209.1	-	944	No protein	-	lncRNA	-	-
ENST00000795208.1	-	897	No protein	-	lncRNA	-	-
ENST00000795216.1	-	852	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000795217.1	-	835	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000702127.2	-	820	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000702819.2	-	795	No protein	-	lncRNA	-	-
ENST00000795221.1	-	761	No protein	-	lncRNA	-	-
ENST00000691098.1	-	725	No protein	-	lncRNA	-	-
ENST00000795223.1	-	699	No protein	-	lncRNA	-	-
ENST00000795220.1	-	690	No protein	-	lncRNA	-	-
ENST00000795218.1	-	665	No protein	-	lncRNA	-	-
ENST00000701908.2	-	634	No protein	-	lncRNA	-	-
ENST00000601072.3	-	566	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000795227.1	-	565	No protein	-	lncRNA	-	-
ENST00000795210.1	-	547	No protein	-	lncRNA	-	-
ENST00000795212.1	-	462	No protein	-	lncRNA	-	-
ENST00000795226.1	-	404	No protein	-	lncRNA	-	-
ENST00000795222.1	-	397	No protein	-	lncRNA	-	-
ENST00000795211.1	-	389	No protein	-	lncRNA	-	-
ENST00000795225.1	-	374	No protein	-	lncRNA	-	-
ENST00000795224.1	-	266	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 566 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000601072.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000601072.3

Summary

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Transcript: ENST00000601072.3

Summary

About Us

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