Transcript: ENST00000429480.3 ICMT-DT-201

Description

ICMT divergent transcript [Source:HGNC Symbol;Acc:HGNC:28620]

Gene Synonyms

C1ORF211, LINC00337, MGC40168, NCRNA00337

Location

Chromosome 1: 6,235,410-6,239,444 forward strand.

About this transcript

This transcript has 4 exons and maps to 290 oligo probes.

Gene

This transcript is a product of gene ENSG00000225077.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000650463.1	ICMT-DT-203	2040	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000796170.1	ICMT-DT-209	1892	No protein	-	lncRNA	-	-
ENST00000796166.1	ICMT-DT-205	1891	No protein	-	lncRNA	-	-
ENST00000796172.1	ICMT-DT-211	1805	No protein	-	lncRNA	-	-
ENST00000429480.3	ICMT-DT-201	1728	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000796173.1	ICMT-DT-212	1699	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000796169.1	ICMT-DT-208	1549	No protein	-	lncRNA	-	-
ENST00000796171.1	ICMT-DT-210	1513	No protein	-	lncRNA	-	-
ENST00000796168.1	ICMT-DT-207	1468	No protein	-	lncRNA	-	-
ENST00000796165.1	ICMT-DT-204	1397	No protein	-	lncRNA	-	-
ENST00000441724.1	ICMT-DT-202	1138	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000796174.1	ICMT-DT-213	971	No protein	-	lncRNA	-	-
ENST00000796167.1	ICMT-DT-206	899	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,728 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000429480.3

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana (TAGENE) manual annotation have the same sequence, for every base pair. See article.

Transcript: ENST00000429480.3 ICMT-DT-201

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Transcript: ENST00000429480.3 ICMT-DT-201

Summary

About Us

Get help

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