Description

protein tyrosine phosphatase, non-receptor type 20 [Source:HGNC Symbol;Acc:HGNC:23423]

Synonyms

PTPN20B, CT126, bA42B19.1, DKFZP566K0524, PTPN20A, bA142I17.1

Location
About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 12 variations and maps to 555 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PTPN20-201ENST00000374218.62872339aaENSP00000363335
 
Protein coding
CCDS73114Q4JDL3 NM_001042357
NM_001042363
NP_001035816
NP_001035822
TSL:5GENCODE basicAPPRIS ALT2
PTPN20-205ENST00000395721.62779339aaENSP00000379071
 
Protein coding
CCDS73114Q4JDL3 NM_001320681
NM_001352521
NP_001307610
NP_001339450
TSL:1GENCODE basicAPPRIS ALT2
PTPN20-204ENST00000374346.72481226aaENSP00000363466
 
Protein coding
CCDS73111Q4JDL3 NM_015605
NP_056420
TSL:1GENCODE basic
PTPN20-207ENST00000395725.72226145aaENSP00000379075
 
Protein coding
CCDS73115Q4JDL3 NM_001042364
NM_001352532
NP_001035823
NP_001339461
NP_001339462
TSL:5GENCODE basic
PTPN20-206ENST00000395722.7199564aaENSP00000379072
 
Protein coding
CCDS73116Q4JDK3 NM_001320682
NM_001352547
NM_001352551
NP_001307611
NP_001339476
NP_001339480
TSL:1GENCODE basic
PTPN20-203ENST00000374342.6192964aaENSP00000363462
 
Protein coding
CCDS73116Q4JDK3 NM_001042365
NP_001035824
TSL:1GENCODE basic
PTPN20-216ENST00000506080.51401339aaENSP00000421921
 
Protein coding
CCDS73114Q4JDL3 -TSL:1GENCODE basicAPPRIS ALT2
PTPN20-202ENST00000374339.41388420aaENSP00000363459
 
Protein coding
CCDS73110Q4JDL3 NM_001320685
NP_001307614
TSL:1GENCODE basicAPPRIS P4
PTPN20-225ENST00000511769.51339411aaENSP00000424283
 
Protein coding
CCDS73105Q4JDL3 NM_001042358
NP_001035817
TSL:1GENCODE basicAPPRIS ALT2
PTPN20-215ENST00000505814.51244339aaENSP00000426355
 
Protein coding
CCDS73114Q4JDL3 NM_001320686
NM_001320691
NP_001307615
NP_001307620
TSL:1GENCODE basicAPPRIS ALT2
PTPN20-221ENST00000509599.5945226aaENSP00000425012
 
Protein coding
CCDS73111Q4JDL3 NM_001320683
NP_001307612
TSL:1GENCODE basic
PTPN20-226ENST00000513156.5913269aaENSP00000425912
 
Protein coding
CCDS73107Q4JDL3 NM_001042359
NP_001035818
TSL:1GENCODE basic
PTPN20-213ENST00000502705.5854206aaENSP00000420995
 
Protein coding
CCDS81454Q4JDL3 NM_001320684
NP_001307613
NP_001339453
TSL:1GENCODE basic
PTPN20-228ENST00000513266.5818197aaENSP00000422839
 
Protein coding
CCDS81456Q4JDL3 NM_001320688
NP_001307617
TSL:1GENCODE basic
PTPN20-208ENST00000395727.6790228aaENSP00000379077
 
Protein coding
CCDS73109Q4JDL3 NM_001042360
NP_001035819
TSL:1GENCODE basic
PTPN20-222ENST00000509774.5788217aaENSP00000425362
 
Protein coding
CCDS73106Q4JDL3 NM_001042361
NP_001035820
TSL:1GENCODE basic
PTPN20-219ENST00000508602.5742145aaENSP00000424491
 
Protein coding
CCDS73115Q4JDL3 NP_001339462
TSL:1GENCODE basic
PTPN20-223ENST00000509900.5693145aaENSP00000423819
 
Protein coding
CCDS73115Q4JDL3 NP_001339462
TSL:1GENCODE basic
PTPN20-229ENST00000513756.564064aaENSP00000479990
 
Protein coding
CCDS73116Q4JDK3 -TSL:1GENCODE basic
PTPN20-220ENST00000508715.558664aaENSP00000480504
 
Protein coding
CCDS73116Q4JDK3 NM_001320689
NP_001307618
TSL:1GENCODE basic
PTPN20-214ENST00000503851.5545136aaENSP00000427676
 
Protein coding
CCDS73108Q4JDL3 NM_001042362
NP_001035821
TSL:1GENCODE basic
PTPN20-227ENST00000513159.545064aaENSP00000477675
 
Protein coding
CCDS73116Q4JDK3 NM_001320690
NP_001307619
TSL:1GENCODE basic
PTPN20-212ENST00000502254.5599145aaENSP00000421404
 
Protein coding
-Q4JDL3 NP_001339460
NP_001339464
TSL:1GENCODE basic
PTPN20-209ENST00000417004.5567126aaENSP00000396009
 
Protein coding
-Q5T1G4 -CDS 3' incompleteTSL:5
PTPN20-217ENST00000506881.545768aaENSP00000422384
 
Protein coding
-D6RC68 -CDS 3' incompleteTSL:3
PTPN20-210ENST00000437863.2312562aaENSP00000403444
 
Nonsense mediated decay
-A0A0A0MSU6 -TSL:5
PTPN20-218ENST00000508357.5121362aaENSP00000426681
 
Nonsense mediated decay
-D6RF36 -TSL:1
PTPN20-224ENST00000510335.51153104aaENSP00000421453
 
Nonsense mediated decay
-Q4JDL3 -TSL:1
PTPN20-211ENST00000466912.5446No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 7, Coding exons: 5, Transcript length: 2,226 bps, Translation length: 145 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS73115

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q4JDL3

Transcript Support Level (TSL)

TSL:5

Version

ENST00000395725.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays