Description

protein tyrosine phosphatase, non-receptor type 20 [Source:HGNC Symbol;Acc:HGNC:23423]

Synonyms

CT126, PTPN20A, bA42B19.1, DKFZP566K0524, bA142I17.1, PTPN20B

Location
About this transcript

This transcript has 10 exons, is annotated with 18 domains and features, is associated with 15 variations and maps to 788 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PTPN20-201ENST00000374218.62872339aaENSP00000363335
 
Protein coding
CCDS73114Q4JDL3 NM_001042357
NM_001042363
NP_001035816
NP_001035822
TSL:5GENCODE basicAPPRIS ALT2
PTPN20-205ENST00000395721.62779339aaENSP00000379071
 
Protein coding
CCDS73114Q4JDL3 NM_001320681
NP_001307610
TSL:1GENCODE basicAPPRIS ALT2
PTPN20-204ENST00000374346.72481226aaENSP00000363466
 
Protein coding
CCDS73111Q4JDL3 NM_015605
NP_056420
TSL:1GENCODE basic
PTPN20-207ENST00000395725.72226145aaENSP00000379075
 
Protein coding
CCDS73115Q4JDL3 NM_001042364
NP_001035823
TSL:5GENCODE basic
PTPN20-206ENST00000395722.7199564aaENSP00000379072
 
Protein coding
CCDS73116Q4JDK3 NM_001320682
NP_001307611
TSL:1GENCODE basic
PTPN20-203ENST00000374342.6192964aaENSP00000363462
 
Protein coding
CCDS73116Q4JDK3 NM_001042365
NP_001035824
TSL:1GENCODE basic
PTPN20-216ENST00000506080.51401339aaENSP00000421921
 
Protein coding
CCDS73114Q4JDL3 -TSL:1GENCODE basicAPPRIS ALT2
PTPN20-202ENST00000374339.41388420aaENSP00000363459
 
Protein coding
CCDS73110Q4JDL3 NM_001320685
NP_001307614
TSL:1GENCODE basicAPPRIS P4
PTPN20-225ENST00000511769.51339411aaENSP00000424283
 
Protein coding
CCDS73105Q4JDL3 NM_001042358
NP_001035817
TSL:1GENCODE basicAPPRIS ALT2
PTPN20-215ENST00000505814.51244339aaENSP00000426355
 
Protein coding
CCDS73114Q4JDL3 NM_001320686
NM_001320691
NP_001307615
NP_001307620
TSL:1GENCODE basicAPPRIS ALT2
PTPN20-221ENST00000509599.5945226aaENSP00000425012
 
Protein coding
CCDS73111Q4JDL3 NM_001320683
NP_001307612
TSL:1GENCODE basic
PTPN20-226ENST00000513156.5913269aaENSP00000425912
 
Protein coding
CCDS73107Q4JDL3 NM_001042359
NP_001035818
TSL:1GENCODE basic
PTPN20-213ENST00000502705.5854206aaENSP00000420995
 
Protein coding
CCDS81454Q4JDL3 NM_001320684
NP_001307613
TSL:1GENCODE basic
PTPN20-228ENST00000513266.5818197aaENSP00000422839
 
Protein coding
CCDS81456Q4JDL3 NM_001320688
NP_001307617
TSL:1GENCODE basic
PTPN20-208ENST00000395727.6790228aaENSP00000379077
 
Protein coding
CCDS73109Q4JDL3 NM_001042360
NP_001035819
TSL:1GENCODE basic
PTPN20-222ENST00000509774.5788217aaENSP00000425362
 
Protein coding
CCDS73106Q4JDL3 NM_001042361
NP_001035820
TSL:1GENCODE basic
PTPN20-219ENST00000508602.5742145aaENSP00000424491
 
Protein coding
CCDS73115Q4JDL3 -TSL:1GENCODE basic
PTPN20-223ENST00000509900.5693145aaENSP00000423819
 
Protein coding
CCDS73115Q4JDL3 -TSL:1GENCODE basic
PTPN20-229ENST00000513756.564064aaENSP00000479990
 
Protein coding
CCDS73116Q4JDK3 -TSL:1GENCODE basic
PTPN20-220ENST00000508715.558664aaENSP00000480504
 
Protein coding
CCDS73116Q4JDK3 NM_001320689
NP_001307618
TSL:1GENCODE basic
PTPN20-214ENST00000503851.5545136aaENSP00000427676
 
Protein coding
CCDS73108Q4JDL3 NM_001042362
NP_001035821
TSL:1GENCODE basic
PTPN20-227ENST00000513159.545064aaENSP00000477675
 
Protein coding
CCDS73116Q4JDK3 NM_001320690
NP_001307619
TSL:1GENCODE basic
PTPN20-212ENST00000502254.5599145aaENSP00000421404
 
Protein coding
-Q4JDL3 -TSL:1GENCODE basic
PTPN20-209ENST00000417004.5567126aaENSP00000396009
 
Protein coding
-Q5T1G4 -CDS 3' incompleteTSL:5
PTPN20-217ENST00000506881.545768aaENSP00000422384
 
Protein coding
-D6RC68 -CDS 3' incompleteTSL:3
PTPN20-210ENST00000437863.2312562aaENSP00000403444
 
Nonsense mediated decay
-A0A0A0MSU6 -TSL:5
PTPN20-218ENST00000508357.5121362aaENSP00000426681
 
Nonsense mediated decay
-D6RF36 -TSL:1
PTPN20-224ENST00000510335.51153104aaENSP00000421453
 
Nonsense mediated decay
-Q4JDL3 -TSL:1
PTPN20-211ENST00000466912.5446No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 10, Coding exons: 7, Transcript length: 2,872 bps, Translation length: 339 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS73114

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q4JDL3

Transcript Support Level (TSL)

TSL:5

Version

ENST00000374218.6

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays